TABLE 1.
Primer | Sequencea | Positionb | Primer use |
---|---|---|---|
A | −5′ GTATGGGATGCCACTCAGCTCAAAC 3′ | 378-354 | Inverse PCR |
B | +5′ TGCCGGAAGCAGCTTTGGAATTCAC 3′ | 567-591 | Inverse PCR |
C | +5′ AAGGCATATCGAGCCATGAACTGCA 3′ | 867-892 | Inverse PCR |
D | −5′ AGCCGTCAAAGGACTCCATCCTGTG 3′ | 613-591 | Inverse PCR |
LigBamHI | +5′ CTGGATCCAGTGGTGAATGAGCTGG 3′ | −55-−31 | ddlc. innocuum cloning |
LigSalI | −5′ GCTTGTCGACGGAATCAGCTTCTG 3′ | 1178-1154 | ddlc. innocuum cloning |
RacBamHI | +5′ CCGTTTCCGGATCCGATTGACAAG 3′ | 1018-1041 | C. innocuum racemase cloning |
RacSall | −5′ ATTGTCGACCTTCTCTTGAAAAATAG 3′ | 2265-2240 | C. innocuum racemase cloning |
XYSacII | +5′ TTGAGAGCTCTGGCAGAGGAG 3′ | −28-−9 | vanXYc cloning |
XYBamHI | −5′ GTTCGCATAATAAATAAAGGATCCGA 3′ | 589-564 | vanXYc cloning |
Restriction sites introduced in the primer sequence are underlined; +, direct primer; −, reverse primer.
Position relative to the ATG start codon in the ddlc. innocuum or in the vanXYc genes.