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. 2014 Sep 8;9(9):e107150. doi: 10.1371/journal.pone.0107150

Table 2. Determination of allelic diversity at each MIRU-VNTR locus of 197 isolates of the Euro-American lineage.

TR copiesa Number of isolates at MIRU-VNTR locus
VNTR 42 VNTR 43 MIRU 04 MIRU 40 MIRU 10 MIRU 16 1955 QUB-11b ETR-A VNTR 47 MIRU 26 MIRU 31 VNTR 52 QUB-26 VNTR 53
0 18 1 5 18
1 79 2 2 58 15 9 3 2 65 19 12 5 37
2 73 14 186 35 6 55 74 41 111 84 21 38 79 5 93
3 10 41 7 43 76 115 102 51 71 1 14 150 83 8 40
4 5 130 50 91 10 9 67 13 47 33 8 10 24 3
5 8 1 6 21 3 20 82 1 8 52
6 4 2 13 8 37
7 1 1 17 32
8 2 18
9 1 11
Ub 12 2 2 1 1 5 6
Allelic diversity 0.65 0.50 0.10 0.77 0.62 0.56 0.58 0.76 0.55 0.65 0.76 0.38 0.65 0.83 0.67
a

Numbers of repeat units at the MIRU-VNTR locus.

b

U, undetermined (no PCR product was obtained; not considered for calculation of allelic diversity.