Table 4.
Numbers of Simple Sequence Repeats (SSRs) and their co-localization with pre-miRNAs in sweet orange
| Repeat unit | Repeat type | Frequency of SSR region co-localize with pre-miRNAs |
|---|---|---|
| A | Mononucleotide | 1 |
| G | Mononucleotide | 1 |
| T | Mononucleotide | 5 |
| AC | Dinucleotide | 2 |
| AG | Dinucleotide | 5 |
| AT | Dinucleotide | 2 |
| CT | Dinucleotide | 3 |
| GA | Dinucleotide | 7 |
| GT | Dinucleotide | 1 |
| TA | Dinucleotide | 12 |
| TC | Dinucleotide | 3 |
| AAG | Trinucleotide | 1 |
| ACA | Trinucleotide | 1 |
| ATA | Trinucleotide | 1 |
| ATT | Trinucleotide | 3 |
| CAG | Trinucleotide | 1 |
| CTT | Trinucleotide | 7 |
| GAT | Trinucleotide | 2 |
| GTG | Trinucleotide | 1 |
| TAA | Trinucleotide | 5 |
| TCA | Trinucleotide | 1 |
| TGC | Trinucleotide | 1 |
| TGG | Trinucleotide | 2 |
| TTC | Trinucleotide | 5 |
| CATG | Tetranucleotide | 1 |
| TCAT | Tetranucleotide | 1 |
| TGCA | Tetranucleotide | 1 |
| TTAA | Tetranucleotide | 2 |
| TTCT | Tetranucleotide | 4 |
| TTTG | Tetranucleotide | 1 |
| TATAAT | Hexanucleotide | 2 |