Table 1.
Evolutionary Conservation of Redox-Sensitive Cysteine Residues
| Species | Prot_ID/Locus | AtTPPD_C159 | AtTPPD_C235 | |
|---|---|---|---|---|
| Prokaryotes | ||||
| Archaea | Themoplasma acidophilum | Q9HIW7 | No | No |
| Bacteria | Escherichia coli | P31678 | No | No |
| Eukaryotes | ||||
| Protists | Phytophtora infestans | DONMM9 | No | No |
| Animals | ||||
| Nematodes | Caenorhabditis elegans | Q9XTQ5 | No | No |
| Caenorhabditis briggsae | A8X485 | No | No | |
| Brugia malayi | A8NS89 | No | No | |
| Insects | Drosophila melanogaster | C9QPE7 | No | No |
| Q9VM18 | No | No | ||
| Anopheles gambiae | Q7PJ67 | No | No | |
| Plants | ||||
| Red algae | Cyanidioschyzon merolae | CMQ148C | No | No |
| Galdieria sulphuraria | M2XOW6 | No | No | |
| Green algae | Ostreococcus tauri | QOOWH8 | No | Yes |
| Chlamydomonas reinhardtii | A8JGL2 | No | Yes | |
| Mosses | Physcomitrella patens | A9RWB0 | No | Yes |
| A9S4E1 | No | Yes | ||
| A9SZE3 | No | Yes | ||
| A9TV90 | No | Yes | ||
| A9TC22 | No | Yes | ||
| Ferns | Selaginella mollendorffii | D8SOQ9 | No | Yes |
| D8SBD6 | No | Yes | ||
| D8SUZ5 | No | Yes | ||
| Gymnosperms | Picea glauca | est_Pagl_157592577 | Yes | Yes |
| UniGene_1928047 | Yes | Yes | ||
| UniGene_5419283 | Yes | Yes | ||
| UniGene_2303759 | n.d. | Yes | ||
| Picea abies | MA_9055473g | Yes | Yes | |
| MA_9368348g | n.d. | Yes | ||
| MA_331962g | Yes | n.d | ||
| Pinus taeda | isotig18254 | Yes | Yes | |
| scaffold172504.1 | Yes | Yes | ||
| tcaffold5357 | Yes | Yes | ||
| Angiosperm monocots | Oryza sativa | Q75WV3 | No | Yes |
| QODDI1 | Yes | Yes | ||
| Q9FWQ2 | No | Yes | ||
| Q10KF5 | Yes | Yes | ||
| Q6ZAL2 | Yes | Yes | ||
| Q6ZGP8 | Yes | Yes | ||
| Q7XI41 | Yes | Yes | ||
| Q7XT34 | No | Yes | ||
| QOD6F4 | No | Yes | ||
| Q6H5L4 | Yes | Yes | ||
| Zea mays | Q1W5S8 | Yes | Yes | |
| B6STK8 | Yes | Yes | ||
| Q1W5S7 | Yes | Yes | ||
| B4FVF6 | No | Yes | ||
| B4FPT4 | Yes | Yes | ||
| B4FST3 | Yes | Yes | ||
| COHHB8 | Yes | Yes | ||
| Angiosperm dicots | Arabidopsis thaliana | At5g51460 | No | Yes |
| At1g78090 | No | Yes | ||
| At1g22210 | No | Yes | ||
| At1g35910 | Yes | Yes | ||
| At2g22190 | Yes | Yes | ||
| At4g12430 | No | Yes | ||
| At4g22590 | No | Yes | ||
| At4g39770 | Yes | Yes | ||
| At5g10100 | Yes | Yes | ||
| At5g65140 | Yes | Yes | ||
| Medicago truncatula | G7IYG6 | No | Yes | |
| G7J6S8 | No | Yes | ||
| G7JK40 | No | Yes | ||
| G7KAB1 | Yes | Yes | ||
| Vitis vinifera | F6HP93 | No | Yes | |
| LOC100248172 | No | Yes | ||
| LOC100251837 | No | Yes | ||
| LOC100258645 | No | Yes | ||
| EOCRI8 | Yes | Yes | ||
| F6HCY3 | No | Yes | ||
| LOC100258773 | Yes | Yes | ||
| Populus trichocarpa | B9GVI1 | No | Yes | |
| B9N3Q1 | No | Yes | ||
| B9I4N1 | No | Yes | ||
| B9H748 | Yes | Yes | ||
| A9PCZ6 | Yes | Yes | ||
| B9GUL5 | Yes | Yes | ||
| B9I555 | No | Yes | ||
| B9HF10 | Yes | Yes | ||
| B9ICS4 | No | Yes | ||
Presence of cysteine residues corresponding to C159 and C235 of TPPD in several species of archaea, bacteria, protists, invertebrates, lower and higher plants. Due to the lack of complete gene annotation in gymnosperm genomes, some TBLASTN searches retrieved incomplete transcripts or genomic scaffolds, which only allowed determination of the presence of one of the two redox-sensitive cysteine residues.
n.d., not determined.