Table 1. Homology Modeling Data.
model | template | alignment algorithm | percent similarity | percent identity | modeling software | Molpdf score |
---|---|---|---|---|---|---|
A | 1ETP | Clustal W2 | 49% (100/205) | 15% (32/205) | MODELLER version 9.10 | 0.24 (0.49, highest) |
B | 1ETP | Clustal Omega | 45% (92/205) | 16% (33/205) | MODELLER version 9.10 and version 9.12 | 0.12 (0.28, highest) |
C | 3MK7c | Clustal W2 | 57% (116/205) | 28% (68/205) | MODELLER version 9.10 | 0.46 (highest) |
D | 3MK7c | Phyre2 | 57% (116/205) | 28% (58/205) | I-TASSER and PHYRE2 | 3.2 Å resolution N/A |