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. 2014 Sep 10;5:454. doi: 10.3389/fpls.2014.00454

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Copyright © 2014 Pernaci, De Mita, Andrieux, Pétrowski, Halkett, Duplessis and Frey.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Pairwise linkage disequilibrium between all markers belonging to assembly scaffolds 1 through 7. The figure does not account for physical distance. Black lines separate scaffolds. All pairs are represented twice, above and below the diagonal. Each pair is represented by a single pixel. The color code is based on Fisher's exact test P-value: red, P < 10⁻¹⁰; orange, P < 10⁻⁸; yellow, P < 10⁻⁶; purple, P < 10⁻⁴; blue, P < 10⁻²; white, larger P-values or not computed.