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| Motifs Length | Number of Sets | Total running time in minutes | |||
| TEIRESIAS | MEME | SLiMFinder | MotifHound | ||
| 3 | 330 | 26 | 113 | 140 | 21 |
| 4 | 660 | 57 | 251 | 774 | 83 |
| 5 | 990 | 91 | 376 | 2808 | 207 |
| 6 | 1320 | 129 | 476 | 7869 | 417 |
| 7 | 1650 | 170 | 608 | 18632 | 796 |
| 8 | 1980 | 215 | 740 | 37153 | 1645 |
| 9 | 2310 | 255 | 863 | 58457 | 3096 |
| 10 | 2640 | 493 | 1003 | 80689 | 5866 |
| Total | 11880 | 1436 | 4430 | 206522 | 12133 |
