TABLE 1.
NMR data and structure determination details for HYBΔC
NMR data | |
---|---|
All NOE distance restraintsa | 1087 |
Intra-residue | 224 |
Sequential (|i–j| = 1) | 338 |
Medium range (1 <|i–j|<5) | 193 |
Long range (|i–j|≥5) | 344 |
Hydrogen bond restraints | 21 |
Dihedral angle restraints (ϕ, ψ)b | 110 |
Residual dipolar coupling restraints | 55 |
Energy statistics X-PLOR energy (kcal mol−1) | |
Enoe | 76.1 ± 4.8 |
Ecdih | 1.26 ± 0.26 |
Erdc | 20.2 ± 3.7 |
Deviations from idealized covalent geometryc | |
R.m.s. deviations of bond lengths (Å) | 0.0031 ± 0.0031 |
R.m.s. deviations of bond angles (°) | 0.430 ± 0.015 |
R.m.s. deviations of improper angles (°) | 0.358 ± 0.011 |
Deviations from experimental restraints | |
R.m.s. deviations of distance restraints (Å) | 0.0369 ± 0.0012 |
R.m.s. deviations of dihedral angle restraints (°) | 0.265 ± 0.074 |
Ramachandran plot analysis (%)d | |
Residues in allowed region | 96.9% |
Residues in generally allowed regions | 2.3% |
Residues in disallowed regions | 0.8% |
Average R.m.s. deviations from mean structure (Å)e | |
Heavy atoms | 1.29 ± 0.21 |
Backbone atoms (N, CA, C′, O) | 0.63 ± 0.21 |
a The distance restraints were obtained by classifying the NOE cross peaks into three categories: strong (1.8–2.9 Å), medium (1.8–3.5 Å), and weak (1.8–5.0 Å).
b Dihedral angles of backbone φ and ψ were predicted by TALOS (30) using the chemical shifts of Cα, Cβ, Hα, N, and HN.
c Twenty lowest-energy conformers with no NOE violations greater than 0.3 Å and no torsion angle violations greater than 3° were selected from 100 conformers to represent the NMR ensembles.
d Calculated with PROCHECK-NMR (66).
e Calculated with MOLMOL (67) over secondary structure region α1 (131–140), α2 (179–190), β1 (119–123), β2 (127–130) and β3 (154–158).