Skip to main content
. 2014 Jul 29;289(37):25611–25623. doi: 10.1074/jbc.M114.592840

TABLE 1.

NMR data and structure determination details for HYBΔC

NMR data
All NOE distance restraintsa 1087
    Intra-residue 224
        Sequential (|i–j| = 1) 338
        Medium range (1 <|i–j|<5) 193
        Long range (|i–j|≥5) 344
Hydrogen bond restraints 21
Dihedral angle restraints (ϕ, ψ)b 110
Residual dipolar coupling restraints 55
Energy statistics X-PLOR energy (kcal mol−1)
        Enoe 76.1 ± 4.8
        Ecdih 1.26 ± 0.26
        Erdc 20.2 ± 3.7

Deviations from idealized covalent geometryc
    R.m.s. deviations of bond lengths (Å) 0.0031 ± 0.0031
    R.m.s. deviations of bond angles (°) 0.430 ± 0.015
    R.m.s. deviations of improper angles (°) 0.358 ± 0.011

Deviations from experimental restraints
    R.m.s. deviations of distance restraints (Å) 0.0369 ± 0.0012
    R.m.s. deviations of dihedral angle restraints (°) 0.265 ± 0.074

Ramachandran plot analysis (%)d
    Residues in allowed region 96.9%
    Residues in generally allowed regions 2.3%
    Residues in disallowed regions 0.8%

Average R.m.s. deviations from mean structure (Å)e
    Heavy atoms 1.29 ± 0.21
    Backbone atoms (N, CA, C′, O) 0.63 ± 0.21

a The distance restraints were obtained by classifying the NOE cross peaks into three categories: strong (1.8–2.9 Å), medium (1.8–3.5 Å), and weak (1.8–5.0 Å).

b Dihedral angles of backbone φ and ψ were predicted by TALOS (30) using the chemical shifts of Cα, Cβ, Hα, N, and HN.

c Twenty lowest-energy conformers with no NOE violations greater than 0.3 Å and no torsion angle violations greater than 3° were selected from 100 conformers to represent the NMR ensembles.

d Calculated with PROCHECK-NMR (66).

e Calculated with MOLMOL (67) over secondary structure region α1 (131–140), α2 (179–190), β1 (119–123), β2 (127–130) and β3 (154–158).