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. Author manuscript; available in PMC: 2014 Sep 12.
Published in final edited form as: FEBS J. 2011 Sep 8;278(19):3579–3595. doi: 10.1111/j.1742-4658.2011.08281.x

Table 3.

Structures related to Snf2 family ATPase region.

Protein Organism PDB Resolution Snf2 family homology Identity/Similarity to Snf2p Ref
Chd1 S. cerevisiae Budding yeast 3mwy 3.7Å e−144 45%/65% [39]
Rad54 D. rerio Zebrafish 1z3i 3.0Å e−128 33%/54% [35]
Sso1653 S. sulfotaricus Archaea 1z63 3.0Å e−125 26%/44% [37]
RapA E. coli Bacteria 3dmq 3.2Å e−36 27%/46% [49]
Hef P. furiosus Archaea 1wp9 2.9Å e−16 28%/49% [51]
XPB A. fulgidus Archaea 2fwr 2.6Å e−16 15%/34% [124]
Vasa D. melanogaster Fruit fly 2db3 2.2Å e−13 19%/38% [125]

Helicase-like superfamily 2 (SF2) structures in Protein Data Bank (PDB) related to Snf2 family by homology of ATPase region. Similarity shown as expectation value for hmmsearch hit with Snf2 family model [26] to PDB database. Identity and similarity for global alignment to Snf2 residues 767-1222 using EMBOSS stretcher. PDB code is for most relevant structure where multiple related accessions deposited.