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. 2014 Sep 12;9(9):e106779. doi: 10.1371/journal.pone.0106779

Table 1. Characteristics of LHON cases and unaffected relatives recruited in the study.

Subjects Gender Age at present (years) Age of onset (years) Age at skin biopsy (years) Fibroblast Passage used G11778A Haplogroup mtDNA/nDNAratio * References
Affected LHON
Pedigree F1 [13], [27]
(A1) M 25 7 20 P6 homoplasmy M7b1a1e1 0.84
(A2) M 26 14 21 P6 homoplasmy M7b1a1e1 0.79
Pedigree F9 [13], [27]
(A3) M 30 9 24 P6 homoplasmy C7a1 0.82
(A4) M 49 12 43 P6 homoplasmy C7a1 0.85
Pedigree F66 [9]
(A5) M 42 36 36 P6 homoplasmy M13c 0.85
(A6) M 37 18 33 P6 homoplasmy M13c 0.68
(A7) M 54 20 50 P6 homoplasmy M13c 0.85
Unaffected LHON
Pedigree F1 (U1) M 30 25 P6 homoplasmy M7b1a1e1 0.72 [13], [27]
Pedigree F9 (U2) M 21 15 P6 homoplasmy C7a1 0.47 [13], [27]
Pedigree F66 (U3) F 49 45 P6 homoplasmy M13c 0.66 [9]
Controls
C1 M 43 37 P6 NO 0.51
C2 M 26 20 P6 NO 0.51
C3 F 46 40 P6 NO 0.66
C4 F 52 46 P6 NO 0.74
C5 M 58 52 P6 NO 0.65

*MtDNA/nuclear DNA from fibroblast of each individual was measured according to Pejznochova M, 2008 [62] by amplification of ND5 gene in mitochondrial genome from position 13466–13650 (GenBank sequence NC_012920 gi:251831106), and PARL gene from nuclear genome from 16912–17165 (GenBank sequence: NC_000003.12 gi:224589815). Real-time PCR amplification was performed on Bio-Rad CFX 96 thermo cycler and the threshold cycle (Ct) was obtained. MtDNA/nuclear DNA ratio was calculated from the Ct (mtDNA)/Ct (nDNA) ratio. The increasing ratio shows decrease in amount of mtDNA per cell [62].