Skip to main content
. 2014 Sep 12;9(9):e106656. doi: 10.1371/journal.pone.0106656

Table 2. PCR Primer pairs for amplification of the TYR gene in OCA1 patients.

Gene name Primer name Exon Locus (nDNA) Primer sequence (5′ to 3′) Amplicon size (bp) Temperature (°C)
TYR AL-1-1F 1–1* 88910556 CAAACTGAAATTCAATAACATATAAGG 678 59
TYR AL-1-1R 88911233 GTGGACAGCATTCCTTCTCC
TYR AL-1-2F 1–2* 88910948 TTCAGAGGATGAAAGCTTAAGATAAA 521 59
TYR AL-1-2R 88911468 CGTCTCTCTGTGCAGTTTGG
TYR AL-1-3F 1–3* 88911171 CTGGCCATTTCCCTAGAGC 605 60
TYR AL-1-3R 88911775 CCACCGCAACAAGAAGAGTC
TYR AL-1-4F 1–4* 88911487 CATCTTCGATTTGAGTGCCC 521 59
TYR AL-1-4R 88912007 CCCTGCCTGAAGAAGTGATT
TYR AL-2F 2 88924298 CCAACATTTCTGCCTTCTCC 442 60
TYR AL-2R 88924739 TCAGCTAGGGTCATTGTCGAT
TYR AL-3F 3 88960909 AGTTATAAATCAAATGGGATAATCA 296 56
TYR AL-3R 88961204 ACATTTGATAGGCACCCTCT
TYR AL-4F 4 89017552 CTGTTTCCAATTTAGTTTTATAC 790 56
TYR AL-4R 89018341 TACAAAATGGCCTATGTTAAGC
TYR AL-5F 5 89028218 TGTCTACTCCAAAGGACTGT 924 55
TYR AL-5R 89029138 GGCACTTAGCTGGATGTGTT

*Shows that due to the large size of exon 1, it is divided into four overlapping fragments.