Clinical and molecular features of sterile and non-sterile site isolates of K. pneumoniae recovered from a single patient.
Day, day of clinical course (as described in text). Site, clinical specimen: W, wound; S, stool; B, blood; K, knee; U, urine. R genes, resistance genes (includes plasmid-associated cephalosporinases and chromosome-associated ampicillinases). ST, sequence type. wt, wild type proteins or residues. For GyrA, ParC, wild type amino acid residues in Quinolone Resistance Determining Regions are S83 (GyrA) and S80 (ParC). NEG, negative by PCR. trunc, truncated due to sequence polymorphism. MER, meropenem susceptibility. S, susceptible. R, resistant.