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. 2014 Aug 27;2014:934351. doi: 10.1155/2014/934351

Table 1.

Details of primers used for PCR amplification of GsSGT ORF, heterologous expression, and real-time expression profiling.

Primer details Primer's name Nucleotide sequence of primer (5′-3′) Length (mer) Tm (°C) GC content (%) Size of the amplicon
Primers used for partial clone, full length cDNA and heterologous expression
Degenerate WsSGTF2 TGGCTACATCTGGACTCCTCAT 22 57.3 50.0  370 bp
WsSGTR2 TGGTTCATCACGGTGGTGCT 20 59.4 55.0
3′RACE GymGTF1 GGCACTGGAGAATACAGGACAGAG 24 58.8 54.2  684 bp
GymGTF2 CCTCGTTGATTGCCCTCATGACTG 24 59.9 54.2
5′RACE GymGTR1 GGTTTAGGCCCCTTCTGTATCCAC 24 59.2 54.2  1.7 kb
GymGTR2 CCAACAACATCAACCAGAGGGCC 23 60.6 56.5
GymURD01 AGAGACTCGATGATGGCCTTGAGC 24 60.5 54.2
GymURD02 AATCACTGAAGTTAGCATGAGTAGCCAGCC 30 61.6 46.7
GymURD03 ACTCCTGTAATTTCTTAGCCATAGCC 26 56.5 42.3
Complete ORF 2.3GymFLF1 TTGGATTAACATATTTGAGCATCCAGGC
28 57.6 39.3  2.1 kb
2.3GymFLF2 TTGAGCATCCAGGCTTCTCTTGCATGG
27 62.8 51.9
2.3GymFLR1 ATTCTGTAATTCCTTGTTCCGTTGTAAACC 30 57.5 36.7
pET-28a expression PTGGTF0N CATATGGATTCTGATGGGACTGGC 24 57.4 50.0  2.1 kb
PTGGTR0B GGATCCCTAAGAACAACAAGGCAGG 25 59.4 52.0

Primers used for semiquantitative and real-time PCR expression studies
RT-PCR Actin3F TTGCCGAGATAATGGCCTAC 20 54.6 50.0  250 bp
Actin3R TACCGCGACTTCGATCTTTT 20 54.0 45.0
SGTF2 TGGCTACATCTGGACTCCTCAT 22 57.3 50.0  370 bp
SGTR2 TGGTTCATCACGGTGGTGCT 20 59.4 55.0
Real-time PCR PTGymGTF2 CCTCGTTGATTGCCCTCATGACTG 24 59.9 54.2  350 bp
PT1.8GymFL1 GGATCCCTAAGAACAACAAGGCAGGCTG 28 62.7 53.6

∗Restriction sites for pET-28a expression are highlighted in bold and underlined.