Table 2. Unique Sphingolipid and Ceramide Species in Normotensive and Hypertensive Female DBA/2J Aqueous Humor.
Lipid Speciesa | Theoretical m/zb |
m/z | Error (Da) |
Average lipid amount (pmol per species/μg protein)c |
LIPIDMAPS ID | PUBCHEM ID | HMDB Accessiond |
---|---|---|---|---|---|---|---|
Sphingomyelin | |||||||
| |||||||
Normotensive Aqueous Humor | |||||||
| |||||||
SM(d16:1/16:0)e | 675.5 | 676.0 | 0.5 | 2.9 | LMSP03010035 | 123068746 | |
SM(d16:0/22:0) | 761.7 | 762.2 | 0.5 | 19.4 | LMSP03010063 | 123068774 | |
| |||||||
Hypertensive Aqueous Humor | |||||||
| |||||||
SM(d18:1/20:1)e | 757.6 | 758.0 | 0.4 | 244.3 | LMSP03010059 | 123068770 | |
SM(d18:0/22:0) | 789.7 | 790.1 | 0.4 | 3.6 | LMSP03010022 | 7850656 | |
SM(d16:1/20:1)e | 729.6 | 730.2 | 0.6 | 0.5 | LMSP03010048 | 123068759 | |
SM(d16:0/20:0) | 733.6 | 734.3 | 0.7 | 36.7 | LMSP03010053 | 123068764 | |
SM(d18:0/24:0) | 817.7 | 818.1 | 0.4 | 15.1 | LMSP03010024 | 7850658 | |
SM(d18:1/22:1) | 785.7 | 786.5 | 0.8 | 71.6 | LMSP03010072 | 123068783 | |
| |||||||
Sphingoid base | |||||||
| |||||||
Normotensive Aqueous Humor | |||||||
| |||||||
(4E,8Z,d18:2) sphingosinee | 298.3 | 297.4 | −0.9 | 2.1 | LMSP01080011 | 74382660 | |
| |||||||
Hypertensive Aqueous Humor | |||||||
| |||||||
Penaresidin Ae | 330.3 | 330.3 | 0.0 | 0.1 | LMSP01080045 | 74382694 | |
| |||||||
Sphingoid base-1-phosphate | |||||||
| |||||||
Normotensive Aqueous Humor | |||||||
| |||||||
Sphinganine-phosphate | 380.3 | 380.8 | 0.5 | 53.9 | LMSP01050002 | 7850620 | HMDB01383 |
C16 Sphingosine-1-phosphate | 350.2 | 350.7 | 0.5 | 2.1 | LMSP01050005 | 123068722 | |
| |||||||
Ceramides | |||||||
| |||||||
Normotensive Aqueous Humor | |||||||
| |||||||
Cer(d18:0/18:1(9Z)) | 564.5 | 565.2 | 0.7 | 3.4 | LMSP02020015 | 49703627 | HMDB11763 |
Cer(d18:1/18:1(9Z)) | 562.5 | 563.3 | 0.8 | 0.1 | LMSP02010003 | 4266351 | HMDB04948 |
SM(d18:0/12:0)e | 647.5 | 648.4 | 0.9 | 0.2 | LMSP03010079 | 123068790 | |
SM(d18:0/15:0)e | 689.6 | 690.4 | 0.8 | 1.8 | LMSP03010091 | 123068802 | |
| |||||||
Hypertensive Aqueous Humor | |||||||
| |||||||
SM(d18:0/17:0)e | 717.6 | 718.6 | 1.0 | 4.0 | LMSP03010046 | 123068757 | |
SM(d16:1/18:0)e | 701.6 | 702.4 | 0.8 | 0.1 | LMSP03010042 | 123068753 | |
SM(d16:1/20:1)e | 727.6 | 728.5 | 0.9 | 0.1 | LMSP03010048 | 123068759 | |
SM(d18:1/20:0) | 757.6 | 758.4 | 0.8 | 0.1 | LMSP03010005 | 7850648 | |
SM(d18:2/22:1) | 781.6 | 781.9 | 0.3 | 7.5 | LMSP03010070 | 123068781 | |
Cer(d18:0/24:1(15Z)) | 648.6 | 649.6 | 1.0 | 4.1 | LMSP02020011 | 7850635 | HMDB11769 |
SM(d16:1/22:1) | 755.6 | 755.3 | −0.3 | 4.0 | LMSP03010058 | 123068769 | |
SM(d18:0/20:0) | 759.6 | 760.4 | 0.8 | 0.1 | LMSP03010021 | 7850655 | |
SM(d18:0/24:0) | 815.7 | 816.4 | 0.7 | 35.0 | LMSP03010024 | 7850658 | |
SM(d18:1/15:0)e | 687.5 | 688.4 | 0.9 | 0.1 | LMSP03010038 | 123068749 | |
SM(d18:2/21:0) | 769.6 | 769.1 | −0.6 | 4.1 | LMSP03010064 | 123068775 |
The lipid species identification is based on Lipidmaps database, customized and used as a .csv file for bioinformatic analyses with the MZmine 2.9 program.
The theoretical mass by charge ratio (m/z) presented is in positive ion mode [M+H]+ for sphingomyelin and sphingoid base. Whereas negative ion mode [M-H]− has been presented for sphingoid base-1-phosphate and ceramide. Error in Da has been provided from theoretical data.
Average standard normalized dataset is presented here. Species that are known bonafide lipids of non-mammalian origin were excluded. However, where the origin in mammalian or human is unclear those entities were retained.
The only lipids species in this table found to have an HMDB identifier (HMDB01383, HMDB11763, HMDB04948, HMDB11769), the following details have been reported: Localization: cytoplasm, extracellular, membrane, endoplasmic reticulum. Functions: cell signaling, component of glycosphingolipid metabolism, fuel and energy storage, fuel or energy source, membrane integrity/stability, component of glycerolipid metabolism, component of glycerophospholipid metabolism,component of prostaglandin and leukotriene metabolism, and second messenger.
Lipids common to females and males.