Table 2.
The prediction results of 13 archaeal chromosomesa.
| Organism | Refseq | OriCs in DoriC | OriCs predicted by Ori-Finder 2 | True positive |
|---|---|---|---|---|
| Aeropyrum pernix K1 | NC_000854 | 2 | 2 | 1 |
| Pyrococcus abyssi GE5 | NC_000868 | 1 | 1 | 1 |
| Methanothermobacter thermautotrophicus str. Delta H chromosome | NC_000916 | 1 | 2 | 1 |
| Archaeoglobus fulgidus DSM 4304 | NC_000917 | 1 | 1 | 0 |
| Pyrococcus horikoshii OT3 | NC_000961 | 1 | 1 | 1 |
| Halobacterium sp. NRC-1 | NC_002607 | 2 | 4 | 2 |
| Pyrococcus furiosus DSM 3638 | NC_003413 | 1 | 1 | 1 |
| Hyperthermus butylicus DSM 5456 | NC_008818 | 2 | 1 | 1 |
| Pyrobaculum calidifontis JCM 11548 | NC_009073 | 1 | 1 | 0 |
| Haloferax volcanii DS2 | NC_013967 | 5 | 6 | 5 |
| Haloarcula hispanica ATCC 33960 chromosome II | NC_015943 | 4 | 7 | 3 |
| Haloarcula hispanica ATCC 33960 chromosome I | NC_015948 | 5 | 1 | 1 |
| Nitrosopumilus maritimus SCM1 | NC_010085 | 1 | 1 | 1 |
| Total | – | 27 | 29 | 18 |
a
Note that the detailed information is available at http://tubic.tju.edu.cn/Ori-Finder2/doc.php#9.