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. 2014 Sep 15;9(9):e107729. doi: 10.1371/journal.pone.0107729

Table 3. MD/MM-PB(GB)SA binding affinity estimates for NAD+ in SIRT3:Ac-CS2:NAD+ and Sir2Tm:Ac-p53:NAD+ in catalytically unproductive (with NAM) binding modes.

SIRT3:Ac-CS2:NAD+:NAM Sir2Tm:Ac-p53:NAD+:NAM
Average Std. Dev. Average Std. Dev.
ΔVDWAALS −72.94 4.35 −72.40 4.57
ΔEEL 52.57 13.53 −82.21 20.85
ΔEGB −33.94 12.02 81.85 15.75
ΔESURF −8.81 0.28 −9.03 0.33
ΔEPB −27.80 12.52 96.05 18.91
ΔENPOLAR −44.93 1.14 −47.08 1.44
ΔEDISPER 85.00 1.46 89.48 1.83
ΔG_gas −20.37 13.27 −154.60 21.64
ΔG_solv_igb2 −42.76 12.10 72.82 15.62
ΔG_solv_pb 12.27 12.58 138.45 19.06
ΔG_igb2 −63.12 4.37 −81.78 8.01
ΔG_pb −8.10 5.71 −16.15 8.35