Table 2.
rs no. | Allelesa | MAFb | Genotypes casesc | Genotypes controlsc | ptrend value | pgenotypic value | pallelic value | ORdominant (95 % CI)d; p value | ORrecessive (95 % CI)e; p value |
---|---|---|---|---|---|---|---|---|---|
rs16260 | A/C | 0.29 | 22/97/131 | 49/213/278 | 0.811 | 0.970 | 0.807 | 0.964 (0.714–1.301); 0.810 | 0.967 (0.571–1.638); 0.900 |
rs9929218 | A/G | 0.29 | 22/102/126 | 48/222/270 | 0.921 | 0.995 | 0.921 | 0.984 (0.729–1.328); 0.917 | 0.989 (0.583–1.678); 0.967 |
rs7186053 | A/G | 0.45 | 48/118/84 | 111/261/168 | 0.480 | 0.766 | 0.474 | 0.893 (0.648–1.229); 0.485 | 0.918 (0.630–1.340); 0.659 |
rs4783573 | A/G | 0.27 | 18/95/137 | 40/210/290 | 0.787 | 0.959 | 0.785 | 0.957 (0.708–1.293); 0.774 | 0.970 (0.544–1.728); 0.917 |
rs16958383 | A/G | 0.19 | 8/78/164 | 23/155/362 | 0.930 | 0.637 | 0.929 | 1.066 (0.777–1.464); 0.690 | 0.743 (0.328–1.686); 0.476 |
rs1801552 | C/ T | 0.36 | 18/125/107 | 75/240/225 | 0.126 | 0.021 | 0.129 | 0.955 (0.705–1.293); 0.764 | 0.481 (0.281–0.824); 0.007 |
Statistically significant results are highlighted in bold (p < 0.00833—Bonferroni correction)
aUnderline denotes the minor allele in the control samples
b MAF minor allele frequency calculated from the control samples
cThe order of genotypes: dd/Dd/DD (d is the minor allele in the control samples)
dDominant model: dd + Dd versus DD (d is the minor allele)
eRecessive model: dd versus Dd + DD (d is the minor allele)