Table 1. Sedimentation and Photophysical Parameters of Different Fluorescent Proteins as a Function of Laser Powera.
molecule | rotor speed | power (mW) | signal/rmsd ratio | rate (1/h) | spatial drift (%/cm) | s (S) | f/f0c |
---|---|---|---|---|---|---|---|
Dronpa | 50 000 | 50.2 | 480 | 0.257 (0.250–0.265) | 7.1 (6.3–7.9) | 2.75 | 1.31 |
50 000 | 8.4 | 320 | 0.030d (0.028–0.032)d | 3.4 (2.6–4.0)d | 2.74 | 1.31 | |
50 000 | 2.1 | 260 | 0 (<0.004)d | 2.5 | 2.77 | 1.30 | |
3000 | 50.2 | 0.219 | |||||
Padron | 50 000 | 50.2 | 114 | 1.46 (1.37–1.53) | 0.7 (−1.1–2.8) | 2.64 | 1.25 |
50 000 | 8.4 | 90 | 0.29 (0.16–0.45) | 10.6 (−13–43) | 2.58 | 1.25 | |
50 000 | 2.1 | 14.4 | 0.038 | 9.9 | 2.68 | 1.34 | |
3000 | 50.2 | 1.43 | |||||
EGFP pH 7.4, PBS | 50 000 | 50.2 | 222 | 0.86% (0.4–1.1) | 9.4 (7–14) | 2.72 | 1.40 |
50 000 | 8.4 | 84 | 0.21% (−0.1–1.1) | 11.4 (6–18) | 2.71 | 1.45 | |
50 000 | 2.1 | 64 | 0.74% | 6.8 | 2.75 | 1.38 | |
EGFPe pH 5.7, ce6 | 50 000 | 50.2 | 289 | 0.52%b (0.3–0.8) | 11.9 (9–15) | 2.72 | 1.37 |
All samples at the same laser power and rotor speed were measured side-by-side in the same run. All protein concentrations are 100 nM. Error intervals calculated by F-statistics on a 68% confidence interval.
%/hour linear drift.
Uncorrected for solvent buoyancy, viscosity, and protein partial-specific volume.
With A constrained to zero (limit of complete photobleaching) to avoid correlation with the rate.
In the presence of 100 μM chlorin e6, phosphate buffered saline at pH 5.7.