Table 2.

Summary of CNVs identified from the first and additional passage cells

Sample Name	Sample Type	Coordinate (estimated by aCGH)	Size of CNV	Type of CNV	# of UCSC genes
F8	neuronal iPSC	Chr6:142078223-143497496	1.4 Mb	Duplication	19
F1	B cell iPSC	Chr7:29781592-30059136	278 kb	Duplication	13
F26-1	B cell iPSC	Chr7:90622789-91300864	678 kb	Duplication	8
F26-2	B cell iPSC	Chr17:29585449-30341545	756 kb	Duplication	10
F26-3	B cell iPSC	Chr12:116647004-117237706	591 kb	Complex	1
F31	B cell iPSC	Chr5:132014089-132289454	275 kb	Deletion	1
F33	B cell iPSC	Chr1:107556718-107589113	32 kb	Duplication	2
F21	B cell iPSC	Chr6: 21678897-22044699	366 kb	Duplication	4
G5	B cell iPSC	Chr16:13435265-14134000	699 kb	Duplication	16
G10-1	B cell iPSC	Chr7:57247524-57584194	337 kb	Deletion	1
G10-2	B cell iPSC	Chr10:21750139-22267736	518 kb	Complex	10
G23	B cell iPSC	Chr7:57247524-57584194	337 kb	Deletion	1
G29	B cell iPSC	Chr10:78837653-79185916	348 kb	Deletion	15
G30	B cell iPSC	Chr16:13435265-14134000	699 kb	Duplication	16
G25	B cell iPSC	Chr14:42022784-45355691	3.3 Mb	Complex	17
G19	fibroblast iPSC	Chr11:93815253-94994961	1.2 Mb	Duplication	31
5A -1	neurosphere	Chr2:115093041-116171469	1.1 Mb	Duplication	6
5A -2	neurosphere	Chr9:30975300-31158250	183 kb	Duplication	4
21A	neurosphere	Chr2:115161358-116098550	937 kb	Deletion	6
7D	neurosphere	Chr16:40852266-41284924	433 kb	Deletion	0
F3-new-1 P6/P12	B cell iPSC/more passage	Chr2:76363317-77285102	922 Kb	Mosaic gain	9
F3-new-2 P6/P12	B cell iPSC/more passage	Chr6:142077895-143497398	1.4 Mb	Duplication	19
F3-new-3 P6/P12	B cell iPSC/more passage	Chr16:19625286-21735385	2.1 Mb	Mosaic gain	35
F29-new P12	B cell iPSC/more passage	Chr5:132014471-132408956	394 Kb	Complex	2
F13-new P6/P12	neuronal iPSC/more passage	Chr17:50579500-50917919	338 Kb	Duplication	2