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. Author manuscript; available in PMC: 2015 Oct 15.
Published in final edited form as: J Comput Chem. 2014 Aug 21;35(27):1986–1996. doi: 10.1002/jcc.23713

Figure 2.

Figure 2

Forces on the titration coordinate for Lys obtained with the GRF and FSh schemes. Top: instantaneous force (green) at λ = 0:5 as a function of simulation time. Cumulative averages are shown in black. Middle: average force with standard deviation at different λ values. Black line is the linear fit. Bottom: Potential of mean force along λ. Black and red curves refer to the simulations without and with a chloride ion, respectively.