Table 2. Melting Temperatures of TO-PNA-Peptide:RNA Duplexesa.
complementary TO-PNA-peptide:RNA duplex |
single mismatch TO-PNA-peptide:RNA duplex |
||
---|---|---|---|
duplex | Tm (°C) | duplex | Tm (°C) |
TO1 (12mer): KRAS2 G12D | 72.27 ± 0.25 | TO1 (12mer): KRAS2 G12WT | 64.30 ± 0.06 |
TO2 (13mer): KRAS2 G12D | 70.14 ± 0.12 | TO2 (13mer): KRAS2 G12WT | 63.4 ± 0.47 |
TO3 (12mer): KRAS2 G12WT | 73.23 ± 0.25 | TO3 (12mer): KRAS2 G12D | 60.10 ± 0.41 |
TO4 (13mer): KRAS2 G12WT | 72.33 ± 0.12 | TO4 (13mer): KRAS2 G12D | 63.12 ± 0.36 |
TO5 (12mer): KRAS2 G12V | 72.3 ± 0.25 | TO5 (12mer): KRAS2 G12D | 61.1 ± 0.56 |
TO6 (13mer): KRAS2 G12V | 71.7 ± 0.21 | TO6 (13mer): KRAS2 G12D | 62.2 ± 0.36 |
CD thermal ramps from 25 to 95 °C were monitored at the peak wavelength, 265 nm. Tm of each duplex was determined from first derivative peaks ± standard deviation from n = 3 independent measurements.