Table 5.
Model quality assessment scores.
| AGPase small subunit | Ramachandran plot (In %) | Overall G-factor | Errat | Verify 3D |
MetaMQAP GDT/RMSD (Å) |
RMSD (Å) | |||
|---|---|---|---|---|---|---|---|---|---|
| Most favoured regions | Additional allowed regions | Generously allowed regions | Disallowed regions | ||||||
| MONOCOT | |||||||||
| Oryza sativa ssp. Japonica | 91.1 | 8.4 | 0.5 | 0.0 | −0.06 | 77.60 | 98.65 | 83.880/1.919 | Cα = 0.25; backbone = 0.29 |
| Hordeum vulgare | 91.6 | 7.8 | 0.3 | 0.3 | −0.06 | 82.03 | 98.65 | 84.615/1.537 | Cα = 0.40; backbone = 0.42 |
| Triticum aestivum | 91.4 | 7.8 | 0.5 | 0.3 | −0.10 | 79.72 | 100.00 | 84.842/1.583 | Cα = 0.50; backbone = 0.51 |
| DICOT | |||||||||
| Arabidopsis thaliana | 90.4 | 9.1 | 0.3 | 0.3 | −0.07 | 82.48 | 98.87 | 83.371/1.857 | Cα = 0.28; backbone = 0.32 |
| Solanum lycopersicum | 92.5 | 7.3 | 0.0 | 0.3 | −0.05 | 78.57 | 99.55 | 84.276/1.660 | Cα = 0.23; backbone = 0.28 |
| Beta vulgaris | 92.2 | 7.0 | 0.5 | 0.3 | −0.14 | 75.83 | 95.59 | 80.291/1.926 | Cα = 0.45; backbone = 0.51 |
| Vicia faba1 | 91.4 | 8.1 | 0.3 | 0.3 | −0.06 | 85.48 | 97.74 | 83.088/1.757 | Cα = 0.23; backbone = 0.29 |
| Vicia faba2 | 91.1 | 8.3 | 0.0 | 0.5 | −0.03 | 85.55 | 99.77 | 83.880/1.804 | Cα = 0.19; backbone = 0.25 |
| Cicer arietinum1 | 91.4 | 8.1 | 0.0 | 0.5 | −0.05 | 82.16 | 97.07 | 83.201/1.778 | Cα = 0.25; backbone = 0.31 |
| Cicer arietinum2 | 91.2 | 8.6 | 0.0 | 0.3 | −0.05 | 83.26 | 99.77 | 83.258/1.801 | Cα = 0.21; backbone = 0.25 |
| Brassica napus | 90.1 | 8.8 | 0.5 | 0.5 | −0.07 | 85.48 | 98.42 | 83.937/1.724 | Cα = 0.31; backbone = 0.38 |