Table 3.

Simulation results on the assembly of real/synthetic genomes using reads corrupted by indel noise(Synthetic: randomly generated to fit ${\tilde{\ell }}_{\mathsf{\text{max}}}$, ${\tilde{\ell }}_{\mathsf{\text{crit}}}$, ℓ_crit; (a) : Prochlorococcus marinus ; (b): Helicobacter pylori)

Type	G	pi	pd	${\tilde{\ell }}_{\mathsf{\text{crit}}}$	L	$\frac{NL}{G}$	${\tilde{\ell }}_{\mathsf{\text{max}}}$	ℓcrit	${\tilde{\ell }}_{\mathsf{\text{crit}}}$	$\frac{N}{N_{noiseless}}$	Rate
Synthetic	50000	1.5%	1.5%	23.0 X	200	500	200	100	2.25	2	28/30
Synthetic	50000	1.5%	1.5%	24.1 X	180	500	200	100	2.33	1.8	27/30
a	1440371	1.5%	1.5%	28.53 X	1000	1817	803	770	1.60	1.30	1/1
b	1589953	1.5%	1.5%	20.66 X	2900	4183	2155	2122	1.35	1.37	1/1

a