Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2014 Sep 10;15(Suppl 9):S10. doi: 10.1186/1471-2105-15-S9-S10

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2014 Kwon et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

PMC Copyright notice

Overall flow of CASPER. The proposed CASPER methodology consists of five main steps: (1) preprocessing, (2) constructing a table of k-mer counts, (3) finding the best overlap position, (4) resolving mismatches in the overlap, and (5) merging forward and reverse reads.