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. 2014 Sep 18;10(9):e1004660. doi: 10.1371/journal.pgen.1004660

Figure 3. Relatedness of Host Integration Motif (HIM) sequences for all MdBV proviral segments.

Figure 3

Alignment of HIM sequences with similarity for each site colored in shades of blue. Maximum likelihood analysis shows that three segment groups contain HIMs that form monophyletic groups (segments N and J; segments P, K1 and K; segments A and B) but other relationships could not be resolved.