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. 2014 Sep 19;9(9):e106787. doi: 10.1371/journal.pone.0106787

Table 4. The Hunter-Gaston discriminatory index of the 12 VNTR loci in M. tuberculosis strains from Beijing in 2009.

Order VNTR# locus VNTR alias Number of alleles Range of repeats Allelic diversity (h*) for
Beijing family (n = 884) non-Beijing family (n = 169) All strains (n = 1053)
1 2163 QUB-11b 14 1–10 0.7262 0.7687 0.7637
2 1955 Mtub21 9 1–9 0.6881 0.7339 0.7196
3 4348 MIRU39 7 2–9 0.6848 0.5691 0.7172
4 1644 MIRU16 6 0–8 0.6923 0.7333 0.6962
5 3192 MIRU31 6 0–9 0.6544 0.7394 0.6518
6 0960 MIRU10 6 0–7 0.4990 0.7312 0.5478
7 0802 MIRU40 5 1–7 0.4007 0.5987 0.4725
8 2165 ETR A 5 0–6 0.3760 0.5749 0.4261
9 4156 QUB-4156c 8 0–7,11 0.2867 0.2938 0.2992
10 2401 Mtub30 5 1–10 0.1727 0.5409 0.2459
11 3690 Mtub39 6 1–7 0.2300 0.4136 0.2723
12 2531 MIRU23 7 0–7 0.0443 0.1386 0.0561

*Hunter-Gaston discriminatory index.

#

Variable number tandem repeat.