Table 8.
Distribution of sequence reads among different RNA categories in six libraries of cotton
| Sample | All | rRNA | snoRNA | tRNA | snRNA | miRNA | Unanotation | |
|---|---|---|---|---|---|---|---|---|
| Unique sRNA number | N0 | 440,466 | 32574.5 | 153.5 | 283 | 235 | 626(0.14%) | 406,594 |
| N4 | 431,000 | 36,940 | 166 | 297 | 249 | 650(0.15%) | 392,698 | |
| N24 | 339,460 | 36,430 | 101 | 272 | 257 | 508(0.15%) | 301,892 | |
| E0 | 237,949 | 25,002 | 94 | 176 | 107 | 479(0.20%) | 212,091 | |
| E4 | 365,569 | 34,035 | 133 | 198 | 253 | 449(0.12%) | 330,501 | |
| E24 | 807,866 | 33,293 | 64 | 134 | 90 | 376(0.05%) | 773,909 | |
| Total sRNA number | N0 | 4,226,267 | 1,073,632 | 1705 | 3596 | 1165 | 320,413(7.58%) | 2,825,756 |
| N4 | 4,208,092 | 1,207,710 | 1812 | 3603 | 1065 | 335,427(7.97%) | 2,658,475 | |
| N24 | 4,821,011 | 1,395,936 | 1782 | 3923 | 1656 | 379,404(7.87%) | 3,038,310 | |
| E0 | 2,378,551 | 626,216 | 813.5 | 2138 | 368 | 327,868(13.78%) | 1,421,148 | |
| E4 | 2,999,177 | 814,357 | 1250 | 2197 | 918 | 335,427(11.18%) | 1,845,028 | |
| E24 | 4,048,547 | 461,580 | 236 | 1702 | 234 | 73,340(1.81%) | 3,511,455 |