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. 2014 Aug 13;114(5):1011–1021. doi: 10.1093/aob/mcu169

Table 2.

Fixed effects plant trait and soil property variables retained within the multiple variable REML models for each of the microbial properties; also presented is the percentage variation in each microbial property explained by the site, the retained fixed effects, the proportion of explanation afforded by the fixed effects due to plant traits and soil parameters, respectively, and the significance (P), Wald statistic and the direction and magnitude of the standardized effect for each of the retained fixed effects

Response variable Retained fixed effect % variation explained by site % variation explained after site effect was removed
% variation explained by fixed effect Proportion of % variation explained by plant traits Proportion of % variation explained by soil parameters P Wald effect Effect
Microbial abundances Total microbes Microbial biomass N pH 59·5 89·8 2·9 97·1 <0·0001 41·01 −0·190
Total Soil Carbon <0·0001 69·22 0·085
Specific Leaf Area 0·0012 15·39 −0·020
Fungi and bacteria F/B ratio Total Soil Carbon 97·6 57·1 47·9 52·1 0·0039 10·95 −0·003
Soil DON 0·0375 5·04 0·017
Root Diameter <0·0001 15·29 −0·190
Nitrifiers AOA pH 63·1 78·8 14·6 85·4 <0·001 30·04 0·500
Soil NO3 0·002 12·99 0·470
RDMC 0·0048 10·29 −5·690
AOB NH4+ sorption 17·7 74·9 28·8 71·2 <0·001 18·88 0·900
RDMC 0·0265 5·95 −3·350
RLSM 0·0325 5·43 −0·530
AOA/AOB ratio Soil total Nitrogen 51·5 74·4 0·0 100·0 <0·001 23·91 −1·270
NH4+ sorption <0·001 37·36 0·950
NO3 sorption 0·0013 17·67 −0·120
Soil NH4+ 0·0164 7·88 0·880
NIP pH 24·3 68·7 0·0 100·0 <0·001 20·55 0·428
Soil NH4+/NO3 ratio <0·001 26·63 −0·600
NIB NO3 sorption 6·9 62·1 11·4 88·6 0·023 6·57 0·400
RDMC 0·042 4·92 −4·930
NIP/NIB ratio NH4+ sorption 42·1 58·4 24·3 75·7 <0·001 19·04 −1·060
Leaf C/N ratio 0·0248 6·22 0·036
Denitrifiers NRK NH4+ sorption 55·1 74·4 52·7 47·3 0·0112 8·18 0·258
Root C/N ratio <0·001 28·86 0·017
NRS pH 41·7 56·6 0·0 100·0 <0·001 25·59 0·385
NRK/NRS ratio Root C/N ratio 31·3 79·2 100·0 0·0 <0·001 47·37 94·480
Vegetative Height 0·0074 18·93 87·410
Microbial activities Nitrification Vmax pH 13·3 93·3 0·0 100·0 <0·001 63·28 0·300
NO3 sorption 0·0197 6·93 0·081
Soil NH4+/NO3 ratio <0·001 49·75 −0·457
Km pH 25·1 25·0 0·0 100·0 0·0231 5·97 0·248
Denitrification DEA Total Soil Carbon 30·2 85·0 13·0 87·0 <0·001 78·44 0·006
Soil NH4+/NO3 ratio <0·001 26·28 −0·160
Leaf Carbon Content 0·0008 15·94 −0·006

RLSM (root length per gram of dried soil), C/N ratio (carbon/nitrogen content ration), RDMC (root dry matter content), DON (dissolved organic nitrogen), NO3 and NH4+ sorption (in situ nitrate and ammonium absorbed in resin), F/B ratio (fungal to bacterial PLFA ratio), AOA and AOB (ammonia-oxidizing archaea and bacteria, respectively), NIP and NIB for nitrite oxidizers (genera Nitrospira and Nitrobacter, respectively), NRK and NRS (nitrite reductase genes), Vmax and Km (kinetic response variables of potential nitrification), DEA (potential denitrification enzyme activity).