Table 7. Evidence of sites within the chicken Mx under selection.
Codons Under Selectiona | |||||||||||||||||||
Diversifying Selection | |||||||||||||||||||
Model | 8 | 21 | 41 | 42 | 202 | 308 | 339 | 505 | 539 | 548 | 631 | ||||||||
SLACb | nse | ns | ns | ns | Ns | ns | ns | ns | ns | ns | ns | ||||||||
FELb | ns | ns | 0.079 | ns | Ns | ns | ns | ns | ns | ns | ns | ||||||||
IFELb | ns | ns | 0.071 | ns | ns | ns | ns | 0.047 | ns | ns | ns | ||||||||
RELc | 528 | 325 | 20,769 | 661 | 648 | 4896 | 68 | 1074 | 813 | 10,810 | 706 | ||||||||
FUBARd | ns | ns | 0.963 | 0.902 | ns | 0.953 | ns | 0.983 | 0.909 | 0.968 | ns | ||||||||
MEMEb | ns | ns | 0.018 | ns | 0.077 | ns | ns | ns | 0.054 | ns | ns | ||||||||
Purifying Selection | |||||||||||||||||||
117 | 232 | 373 | 401 | 416 | 443 | 485 | 515 | 673 | |||||||||||
SLACb | <0.001 | ns | ns | Ns | 0.001 | 0.019 | 0.004 | 0.037 | ns | ||||||||||
FELb | <0.001 | ns | 0.099 | Ns | <0.001 | 0.007 | 0.001 | 0.006 | 0.076 | ||||||||||
IFELb | <0.001 | 0.098 | ns | Ns | 0.004 | 0.043 | 0.011 | 0.041 | ns | ||||||||||
RELc | 3.8×1024 | ns | ns | Ns | 4.5×109 | 3822 | 3.6×107 | 2926 | ns | ||||||||||
FUBARd | 0.997 | ns | ns | 0.949* | 1.000 | 0.998 | 1.000 | 0.998 | 0.972 |
chicken Mx codons with evidence of diversifying selection (dNS > dS) or purifying selection (dS > dNS).
p-value, *significance ≤0.1.
Bayes factor, * significance >50 significant.
Posterior probability, *significance ≥0.9.
not significant.