Table 3. Fetal Gender-Dependent Preeclampsia-Associated Changes in Placental DNA Methylation.
Illumina Probe Identifier | % meth PE | % meth Norm | Combined pvalue | Combined Adj. pvalue | Chr | Symbol | Distance to TSS | CPG Island |
cg23717696 | 77 | 57 | 2.9E-05 | 0.05 | X | ITGB1BP2 | 432 | FALSE |
cg09528351 | 54 | 40 | 1.9E-04 | 0.05 | 17 | PIK3R5 | 432 | FALSE |
cg07864297 | 40 | 26 | 1.3E-04 | 0.05 | 14 | ESRRB | 157 | FALSE |
cg05275605 | 59 | 47 | 1.1E-03 | 0.09 | 21 | C21orf123 | 102 | TRUE |
cg07017706 | 58 | 46 | 5.8E-04 | 0.08 | 12 | K6IRS3 | 988 | FALSE |
cg14358743 | 65 | 54 | 1.2E-03 | 0.09 | 13 | GAS6 | 1223 | TRUE |
cg14886269 | 41 | 30 | 1.0E-03 | 0.09 | 1 | TNFRSF18 | 162 | TRUE |
cg01560871 | 62 | 51 | 5.6E-04 | 0.08 | 10 | C10orf27 | 267 | FALSE |
cg17229388 | 66 | 55 | 1.4E-04 | 0.05 | 13 | MGC35169 | 128 | TRUE |
cg16698623 | 71 | 61 | 6.4E-04 | 0.08 | 10 | MGMT | NA | TRUE |
cg01910481 | 74 | 63 | 7.1E-05 | 0.05 | 20 | PLUNC | 266 | FALSE |
CpG sites at which samples from affected individuals (PE) are more highly methylated (10% or greater) than those from normal controls (Norm) are shown. Significant adjusted p values (FDR controlled at 10%) were only identified in pregnancies in which the fetal gender was female.