Table 1. List of proteins associated with pre-synaptic vesicles and pre-synaptic termini that were included in the APP-Interactome.
| Integral vesicle proteins | Associated vesicle proteins | Other pre-synaptic proteins |
| SCAMP1 | AP-2, mu 1 subunit | Synaptosomal-associated protein 25 (Snap25) |
| SV2 | AP-2, mu 2 subunit | Synaptosomal-associated protein 47 (Snap47) |
| synaptogyrin | AP-2 beta 1 subunit | Syntaxin-binding protein 1 (Stxbp1/Munc-18) |
| synaptophysin | clathrin heavy chain | Syntaxin-1A (Stx1a) |
| synaptoporin | complexin | Syntaxin-1B (Stx1b) |
| synaptotagmin-1 | rab1A | γ-soluble NSF attachment protein (SNAPγ) |
| synaptotagmin-2 | rab1B | α-soluble NSF attachment protein (SNAPα) |
| synaptotagmin-12 | rab1C (rab35) | β-soluble NSF attachment protein (SNAPβ) |
| vATPase V0 subunit a1 | rab2 | N-ethylmaleimide-sensitive factor (Nsf) |
| vATPase V0 subunit d1 | rab3A | |
| vATPase V1 subunit A1 | rab3C | |
| vATPase V1 subunit B2, brain isoform | ||
| vATPase V1 subunit C | ||
| vATPase V1 subunit D | ||
| vATPase V1 subunit E | ||
| VAMP I | ||
| VAMP II | ||
| vGLUT1 |