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. 2014 Mar;30(1):58–67. doi: 10.5423/PPJ.OA.09.2013.0097

Table 1.

Primers used in this study

Clone 5′-Oligo 5′-Oligo sequence 3′-Oligo 3′-Oligo sequence Feature
Primers used for yeast two hybrid assay
AltMV TGB1 TGB1_EcoRI_F GAGGAATTCATGAAT-CACTTACTAACC TGB1_BamHI _R GAGGGATCCCCCGAGTA-ATCGGCGGGG EcoRI and BamHI

Primers used for BiFC assay

AltMV TGB1 TGB1_XhoI_F GAGCTCGAGATGAAT-CACTTACTAACC TGB1_XmaI _R GAGCCCGGGCCCGAGTA-ATCGGCGGGG XhoI and XmaI
A. thaliana delta At_delta_XhoI _F GAGCTCGAGATGTTTAAA-CAAGCTTCTC At_delta_XmaI_R GAGCCCGGGCCCGCCC-GAGAGAGCTGC XhoI and XmaI
A. thaliana LHCA4 At_LHCA4_XhoI _F GAGCTCGAGATGGCTACT-GTCACTACTC At_LHCA4_XmaI_R GAGCCCGGGCCCGTT-GAAGGTTTGGAC XhoI and XmaI
A. thaliana LHB1B2 At_LHB1B2_XhoI _F GAGCTCGAGATG-GCTTCCTCAACCATGG At_LHB1B2_XmaI_R GAGCCCGGGCCCCTTTCC-GGGGACGAAG XhoI and XmaI
A. thaliana ATCPIS-CA At_ATCPISCA_XhoI _F GAGCTCGAGATGGCTTTC-GCTACTGG At_ATCPISCA_XmaI_R GAGCCCGGGCCCCATCTC-GGCAGC XhoI and XmaI
N. benthamiana alpha ATPase Nb_ATPase_alpha_SalI _F GAGGTCGACATGAGAAT-CAATCCTAC Nb_ATPase_alpha_XhoI_R GAGCTCGAGCCCTTTCTT-CAAATTGCTC SalI and XhoI
N. benthamiana beta ATPase Nb_ATPase_beta_SalI _F GAGGTCGACATGGTAAC-CATTCGAGCTGACC Nb_ATPase_beta_XhoI_R GAGCTCGAGCCCTGCTT-GTTCCTGAAG SalI and XhoI

Primers used for TRV VIGS

N. benthamiana beta ATPase silencing Nb_beta_silencing_R GAGGGATCCATGGTAAC-CATTCGAGCTGAC Nb_beta_silencing_R GAGCTCGAGCACGGG-TATCTGAGCAATTCT BamHI and XhoI

Primers used for QRT-PCR

QRT-PCR N. ben-thamiana Actin QRT_Nb_Actin_F ATTGTCAG-CAACTGGGATG QRT_Nb_Actin_R ATTGTCAGCAACTGGGATG
QRT-PCR TRV Coat Protein QRT_Nb_ATPase_beta_F TGGGAGATATGTACGAT-GAATC QRT_Nb_TRV_CP_R GCTGTGTAACTTCTTCAA-CAA
QRT-PCR N. ben-thamiana beta ATPase Nb_beta_silencing_F TGGCAAGAGGTCAACGAT QRT_Nb_ATPase_beta_R CCTGTCCAACTTCTAAT-GAATCA