Table 3.
Proteins of Alternanthera mosaic virus -infected N. benthamiana, fraction #5 from 2-D PAGE, identified by MALDI-TOF-MS analysis
| Spot ID | Protein Identity | MPI/Mr | Sequence Coverage | Mowse score | Expected value | Queries Matched | NCBI Acc# |
|---|---|---|---|---|---|---|---|
| 1 | ATP synthase CF1 alpha subunit [Nicotiana tabacum] | 5.14/ 55445 | 34 | 75 | 0.025 | 20 | gi|28261702 |
| 2 | ATP synthase CF1 alpha subunit [Nicotiana tabacum] | 5.14/55461 | 37 | 86 | 0.0017 | 21 | gi|11769 |
| 3 | H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - Bigelov’s tobacco chloroplast | 5.09/ 53549 | 67 | 106 | 8.1e-05 | 30 | gi|11746 |
| 4 | H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - tobacco chloroplast | 5.04/ 53608 | 59% | 110 | 3.2e-05 | 26 | gi|11766 |
| 5 | Hypothetical protein OJ1656_E11.115 (Hypothetical protein P0496D04.55).- Oryza sativa (japonica cultivar-group) | – | – | 58 | 0.38 | 11 | gi|50509337 |
| 6 | Hsr203J homolog (Fragment).- Solanum melongena (Eggplant) (Aubergine) | – | – | 52 | 1.5 | 11 | gi|71361356 |
| 7 | hypothetical protein isoform 1 [Vitis vinifera] | – | – | 70 | 0.067 | 8 | gi|225457881 |
| 8 | H0201G08.12 [Oryza sativa (indica cultivar-group)] | – | – | 63 | 0.33 | 16 | gi|90265159 |
| 9 | predicted protein [Micromonas sp. RCC299] | – | – | 66 | 0.18 | 9 | gi|255085080 |
| 10 | predicted protein [Physcomitrella patens subsp. patens] | – | – | 63 | 0.37 | 12 | gi|168057655 |
| 11 | Catalase isozyme 1 [Cucurbita pepo] | 6.97/57376 | 31 | 73 | 0.039 | 14 | gi|1345673 |
| 12 | predicted protein [Micromonas sp. RCC299] | – | – | 64 | 0.31 | 12 | gi|255085080 |
| 13 | Os03g0831100 [Oryza sativa (japonica cultivar-group)] | – | – | 60 | 0.78 | 12 | gi|115456381 |
| 14 | hypothetical protein SORBIDRAFT_06g028450 [Sorghum bicolor] | – | – | 72 | 0.043 | 25 | gi|242074314 |
| 15 | hypothetical protein isoform 1 [Vitis vinifera] | – | – | 65 | 0.23 | 9 | gi|225457881 |
| 16 | triple gene block 1 protein 26k [Alternanthera mosaic virus] | 7.24/26029 | 23% | 84 | 0.0022 | 7 | gi|85718601 |
| 17 | triple gene block 1 protein 26k [Alternanthera mosaic virus] | 7.24/26029 | 23% | 88 | 0.00085 | 7 | gi|85718601 |
| 18 | predicted protein [Micromonas sp. RCC299] | – | – | 61 | 0.61 | 10 | gi|255085080 |
| 19 | predicted protein [Micromonas sp. RCC299] | – | – | 71 | 0.055 | 11 | gi|255085080 |
| 20 | conserved hypothetical protein [Ricinus communis] | – | – | 59 | 0.96 | 8 | gi|255547265 |