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. 2014 Aug 28;42(17):11119–11135. doi: 10.1093/nar/gku783

Table 1. Oligonucleotide sequences for DNA substrates (5′ to 3′).

Oligonucleotide, size Sequence
Helicase primers
22-15A, 37 nt TTTTTTTTTTTTTTTTTAGGGTTAGGGCATGCACTAC
22-15B, 37 nt GTAGTGCATGCCCTAACCCTAATTTTTTTTTTTTTTT
Exonuclease primers
TelX, 49 nt TTTTTTTTTTTTTTTGGTGATGGTGTATTGAGTGGGATGCATGCACTAC
TelY, 49 nt GTAGTGCATGCATCCCACTCAATACACCATCACCTTTTTTTTTTTTTTT
32-5over, 32 nt TGACGTGACGACGATCAGGGTACGTTCAGCAG
43-5over, 43 nt AGTGCAGACTGCTGCTGAACGTACCCTGATCGTCGTCACGTCA

Partial duplex DNA substrates were constructed by annealing appropriate top primer to template oligonucleotide. 22-15A and 22-15B were used to construct the 37 nt fork, TelX and TelY – the 49 nt fork and 32-5over and 43-5over—the 32/43 nt 5′-overhang.