Table 2.
shRNA sequences used for knockdown experiments
| Gene | GenBank accession number | shRNA target sequence | TaqMan assay ID |
|---|---|---|---|
|
Mecp2 |
NM_010788 |
GCCGATCTGCTGGAAAGTATG |
Mm00465017_m1 |
|
Mef2a |
NM_001033713 |
GCCCTAATGCTTTGTCGTACA |
Mm00488963_m1 |
|
Mef2d |
NM_133665 |
GTAGCTCTCTGGTCACTCC |
Mm00504929_m1 |
|
Nlgn1 |
NM_138666 |
GCAGATTGCCTGAAGTTATGC |
Mm02344307_m1 |
|
Nlgn3 |
NM_172932 |
GGATATGGTGGATTGTCTTCG |
Mm01225953_m1 |
|
Pten |
NM_008960 |
GGACAAGTTCATGTACTTTGA |
Mm00477210_m1 |
|
Shank3 |
NM_021423 |
GGGAGAAGTTGGATGAGATCC |
Mm00498775_m1 |
|
Gapdh |
NM_008084 |
Not Applicable |
4352339E |
| Luciferase (pGL3-Basic) | U47295 | AATTCAGCGGGAGCCACCTGA | Not Applicable |