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. 2014 Aug 21;42(16):10681–10697. doi: 10.1093/nar/gku736

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© The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — HEXplorer score profiles of HIV-1 exons. HZ_EI-score plots of HIV-1 exonic sequences derived from the molecular clone NL4–3. Nucleotides are plotted along the horizontal axis and HEXplorer score values HZ_EI on the vertical axis. Location of the plotted subgenomic region is schematically shown as an open box on the left-hand side. Known exonic SREs are indicated by curly braces and green (enhancer) or red (silencer) rectangles. Five HEXplorer-predicted enhancers are indicated by dashed green rectangles.