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. 2014 Jan 21;3:18. [Version 1] doi: 10.12688/f1000research.3-18.v1

Table 19. InSiGHT missing variants by the combination of variant extraction tools grouped by type, taking into accoung the DNA variant and the impact on the gene product.

Missing variants have been annotated using SETH, thus the variant types delivered by SETH are considered.

Frequency DNA variant type Protein variant type
18
17
12
11
9
8
8
3
2
2
1
1
1
1
1
DELETION
SUBSTITUTION
DELETION
DUPLICATION
DELETION
UNKNOWN
SUBSTITUTION
DELETION
SUBSTITUTION
DUPLICATION
UNKNOWN
SUBSTITUTION
INSERTION
DUPLICATION
DUPLICATION
FRAMESHIFT
UNKNOWN
DELETION
FRAMESHIFT
UNKNOWN
SUBSTITUTION
SUBSTITUTION
SUBSTITUTION
DELETION
UNKNOWN
DELETION
FRAMESHIFT
FRAMESHIFT
SUBSTITUTION
INSERTION