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. 2014 Jan 21;3:18. [Version 1] doi: 10.12688/f1000research.3-18.v1

Table 4. DNA variant extraction recall result on the Variome corpus.

Results for exact and partial matching are present. Each row shows the performance of each method in terms of true positives (TP), false negatives (FN) and Recall. The tools are Extractor of Mutations (EMU), OpenMutationMiner (OMM), MutationFinder (MF), tmVar and SNP Extraction Tool for Human Variations (SETH).

Exact TP FN Recall
EMU
OMM
MF
tmVar
SETH
20
0
0
1
33
32
52
52
51
19
0.3846
0.0000
0.0000
0.0192
0.6346
Partial TP FN Recall
EMU
OMM
MF
tmVar
SETH
33
0
0
5
37
17
52
52
47
12
0.6600
0.0000
0.0000
0.0962
0.7551