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. 2014 Jun 10;3:18. Originally published 2014 Jan 21. [Version 2] doi: 10.12688/f1000research.3-18.v2

Table 18. COSMIC missing variants by the combination of variant extraction tools grouped by type, taking into account the DNA variant and the impact on the gene product.

Missing variants have been annotated using SETH, thus the variant types delivered by SETH are considered.

Frequency DNA variant type Protein variant type
7163
805
759
276
191
171
155
60
56
43
36
33
25
19
3
3
1
SUBSTITUTION
SUBSTITUTION
DELETION
INSERTION
DELETION
UNKNOWN
DELETION
UNKNOWN
INSERTION
UNKNOWN
INSERTION
UNKNOWN
UNKNOWN
SUBSTITUTION
SUBSTITUTION
DELETION
DUPLICATION
SUBSTITUTION
UNKNOWN
FRAMESHIFT
FRAMESHIFT
DELETION
UNKNOWN
UNKNOWN
SUBSTITUTION
INSERTION
DELETION
UNKNOWN
FRAMESHIFT
INSERTION
FRAMESHIFT
INSERTION
SUBSTITUTION
UNKNOWN