Table 4. DNA variant extraction recall result on the Variome corpus.
Results for exact and partial matching are present. Each row shows the performance of each method in terms of true positives (TP), false negatives (FN) and Recall. The tools are Extractor of Mutations (EMU), OpenMutationMiner (OMM), MutationFinder (MF), tmVar and SNP Extraction Tool for Human Variations (SETH).
| Exact | TP | FN | Recall | Char Overlap (%) |
|---|---|---|---|---|
| EMU
OMM MF tmVar SETH |
20
0 0 28 33 |
32
52 52 24 19 |
0.3846
0.0000 0.0000 0.5385 0.6346 |
100.00
100.00 100.00 100.00 100.00 |
| Partial | TP | FN | Recall | Char Overlap (%) |
| EMU
OMM MF tmVar SETH |
33
0 0 43 40 |
17
52 52 9 12 |
0.6600
0.0000 0.0000 0.8269 0.7692 |
68.60
0.00 0.00 77.83 78.17 |