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. Author manuscript; available in PMC: 2015 Sep 25.
Published in final edited form as: Cell. 2014 Sep 25;159(1):188–199. doi: 10.1016/j.cell.2014.08.018

Figure 3. Malat1 Interacts Indirectly with Nascent Transcripts Encoding RNA-Binding Proteins.

Figure 3

(A) Malat1 RAP-RNA[FA-DSG] enrichment at exons and introns, similar to Figure 2B.

(B) Comparison of Malat1 RAP-RNA[FA-DSG] enrichment for the exons (gray) and introns (black) of all genes or of significant gene sets. See also Figure S3.

(C) Malat1 RAP-RNA[FA-DSG] sequencing reads mapping to Hnrnpdl and (D) Tial1, two highly enriched genes encoding RNA-binding proteins. Gray rectangles highlight conserved introns containing RNA elements that control alternative splicing.