Table 1. Results of two-ratio model tests of selection pressure on the STRA6 gene in vertebrate.
Model | Np | l | ω 0 a | ωa | Model Compared | 2Δl | P |
A. One ratio: ω 0 | 177 | −75502.66 | 0.24280 | = ω 0 | |||
B. Free ratio | 351 | −75230.33 | B VS. A | 544.66 | 0 | ||
C. Two ratios: ω0, ωA | 178 | −75492.31 | 0.23709 | 0.32960 | C VS. A | 20.7 | 0.0000 |
D. Two ratios: ω0, ωB | 178 | −75486.85 | 0.23622 | 0.36393 | E VS. A | 31.62 | 0 |
E. Two ratios: ω0, ωC | 178 | −75500.15 | 0.24090 | 0.30001 | F VS. A | 5.02 | 0.0250 |
F. Two ratios: ω0, ωD | 178 | −75499.26 | 0.23764 | 0.26994 | H VS. A | 6.8 | 0.0091 |
G. Two ratios: ω0, ωE | 178 | −75499.95 | 0.24034 | 0.29153 | J VS. A | 5.42 | 0.0199 |
H. Two ratios: ω0, ωF | 178 | −75500.30 | 0.23986 | 0.27722 | K VS. A | 4.72 | 0.0298 |
I. Two ratios: ω0, ωG | 178 | −75483.61 | 0.25688 | 0.19305 | M VS. A | 38.1 | 0 |
J. Two ratios: ω0, ωH | 178 | −75484.24 | 0.25236 | 0.17541 | N VS. A | 36.84 | 0 |
a ω(ωA, ωB, ωC, ωD, ωE, ωF, ωG, ωH) and ω0, are the ratios for branches A, B, C, D, E, F, G, H and other branches, respectively (see Fig. 1).