Table 3.
Physical location of muscle-enriched miRNAs in fish genomes
| miRNA | Zebrafish | Medaka | Stickleback | Tetraodon | Fugu | Nile tilapia | Spotted gar | Coelacanth | Elephant shark |
|---|---|---|---|---|---|---|---|---|---|
| miR-1-1/-133a-2 | Chr23 | Chr7 | S_6 | - | - | S_80 | ChrLG18 | S_6 | S_6 |
| S_121 | |||||||||
| miR-1-2/-133a-1 | S_3540 | Chr17 | S_15 | Chr15_r | S_68 | S_1 | ChrLG9 | S_15 | S_89 |
| miR-206/-133b | Chr20 | Chr24 | S_21 | Chr14 | S_72 | S_183 | ChrLG1 | S_21 | - |
| Chr17 | |||||||||
| miR-208a | - | - | - | - | - | - | - | S_15 | - |
| miR-208b | - | - | - | - | - | - | - | - | - |
| miR-214 | Chr20 | Chr4 | S_138 | Chr1 | S_13 | S_7 | S_15 | ChrLG10 | S_41 |
| miR-214-par* | - | Chr17 | S_15 | Chr15 | S_367 | S_131 | - | - | - |
| miR-499 | Chr11 | Chr5 | S_18 | Chr11 | S_79 | S_19 | S_18 | ChrLG18 | - |
| Chr23 | |||||||||
| Chr23 |
Note - “Chr” means Chromosome; “S_” means Scaffold; “-” means absence of gene; “LG” means Linkage Group; *Paralog copy detected in this work.