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. 2014 Sep 25;9(9):e108428. doi: 10.1371/journal.pone.0108428

Table 1. Primer sequences used for cDNA cloning, real-time quantitative PCR and dsRNA synthesis.

Gene Primer sequence (5′→3′) Fragment length (bp)
PCR CCACCATTCAACCTATCAC 759
AACATCGTCTTTGCCTTC
3′RACE-GSP1 ACACCGAGCGTGGACAAAGAGGA 1178
3′RACE-GSP2 CTATTGCCGCCAAGAAAGCATCCAG
5′RACE-GSP1 TTGGCGGCAATAGCGTTCCAGTCC 2509
5′RACE-GSP2 CTCTTTGTCCACGCTCGGTGTCTT
Real-time quantitative PCR
NADH-F ATAGTTGGCTGTAGAACCAGAGTG 96
NADH-R ACACGAAGGGAAGAGCACATA
BtTRP-F GAAGACACCGAGCGTGGACAAAG 217
BtTRP-R GGCAATAGCGTTCCAGTCCTTTT
dsRNA synthesis primers
TAATACGACTCACTATAGGGAGACCAC GAAGACACCGAGCGTGGACAAAG 244
TAATACGACTCACTATAGGGAGACCAC GGCAATAGCGTTCCAGTCCTTTT

Primer sequences (no underline) are shown for PCR amplification, rapid amplification of cDNA ends (RACE) of BtTRP gene, and the relative quantification real-time PCR for detecting BtTRP mRNA expression patterns; primer sequences plus T7 promoter sequences (underlined) are shown for production of dsRNA transcription templates.