TABLE 5.
Isolate code(s) | Sample type | Region and date (mo, yr) of isolation | Altitude (m) | Sampling site(s) | API codea | AscIb | ApaIc |
---|---|---|---|---|---|---|---|
ER 24 | Soil | A (9, 2007) | 0–500 | A4 | 3350 | SIV1 | IV1 |
ER 36, ER 41, ER 42, ER43 | Soil | A (10, 2007) | 0–500 | A4, A14, A15 | 3350 | SIV1 | IV1 |
ER 66, ER 110, ER 69, ER 70 | Soil | A (11, 2007) | 0–500 | A5, A11, A28 | 3350 | SIV1 | IV1 |
ER 180, ER 185, ER 186 | Soil | A (8, 2008) | 500–1,000 | A26, A30 | 3350 | SIV1 | IV1 |
ER 30 | Soil | A (9, 2007) | 0–500 | A14 | 3370 | SIV2 | IV2 |
ER 35, ER 37, ER 38 | Soil | A (10, 2007) | 0–500; ≥1,500 | A1, A5 | 3370 | SIV2 | IV2 |
ER 40 | Soil | A (10, 2007) | 0–500 | A8 | 3370 | SIV2 | IV2 |
ER 26 | Soil | A (9, 2007) | 0–500 | A7 | 3330 | SIV3 | IV3 |
ER 122 | Water | C (10, 2007) | 0–500 | C | 3330 | WIV4 | IV4 |
ER 123 | Water | B (11, 2007) | 0–500 | B | 3330 | WIV3 | IV3 |
ER 171, 172 | Soil | A (8, 2008) | 0–500 | A11 | 3350 | SIV5 | IV5 |
API code, biochemical profile for species identification: 3330 and 3370, ribose positive; 3350, ribose negative; 3330, glucose-1-phosphate negative.
AscI, PFGE type after restriction digest with the enzyme AscI.
ApaI, PFGE type after restriction digest with the enzyme ApaI.