TABLE 2.
nifH diversity and coverage estimates for root DNA and RNA and shoot DNA
DNA/RNA type and parameter | Value for plant no.: |
Avg | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
E-01 | E-04 | E-06 | E-08 | E-13 | E-18 | E-28 | E-31 | E-36 | E-40 | ||
Root DNA | |||||||||||
No. of taxa | 11 | 12 | 14 | 15 | 8 | 10 | 5 | 5 | 9 | 9 | 9.8 |
No. of clones | 48 | 48 | 48 | 44 | 48 | 46 | 46 | 44 | 44 | 48 | 46.4 |
Good's estimator (%) | 89.58 | 83.33 | 93.75 | 79.55 | 95.83 | 93.48 | 97.83 | 93.18 | 93.18 | 95.83 | 91.55 |
Dominance | 0.201 | 0.237 | 0.133 | 0.137 | 0.248 | 0.158 | 0.306 | 0.717 | 0.185 | 0.170 | 0.249 |
1 − Simpson diversity index | 0.799 | 0.763 | 0.867 | 0.863 | 0.752 | 0.842 | 0.694 | 0.283 | 0.815 | 0.829 | 0.750 |
Shannon's diversity index | 1.897 | 1.8 | 2.311 | 2.266 | 1.647 | 2.002 | 1.333 | 0.622 | 1.86 | 1.929 | 1.766 |
Evenness | 0.606 | 0.50411 | 0.721 | 0.643 | 0.649 | 0.740 | 0.759 | 0.372 | 0.711 | 0.765 | 0.646 |
Root RNA | |||||||||||
No. of taxa | 5 | 6 | 3 | 1 | 1 | 3 | 1 | 6 | 3.25 | ||
No. of clones | 41 | 31 | 32 | 33 | 25 | 19 | 32 | 34 | 30.87 | ||
Good's estimator (%) | 97.56 | 93.33 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 98.86 | ||
Dominance | 0.327 | 0.611 | 0.639 | 1 | 1 | 0.424 | 1 | 0.279 | 0.659 | ||
1 − Simpson diversity index | 0.673 | 0.389 | 0.361 | 0 | 0 | 0.576 | 0 | 0.721 | 0.340 | ||
Shannon's diversity index | 1.271 | 0.884 | 0.656 | 0 | 0 | 0.972 | 0 | 1.492 | 0.659 | ||
Evenness | 0.713 | 0.404 | 0.643 | 1 | 1 | 0.882 | 1 | 0.741 | 0.798 | ||
Shoot DNA | |||||||||||
No. of taxa | 3 | 4 | 5 | 3 | 6 | 7 | 8 | 9 | 8 | 9 | 6.2 |
No. of clones | 38 | 38 | 44 | 41 | 47 | 32 | 31 | 42 | 28 | 35 | 37.6 |
Good's estimator (%) | 100.00 | 97.37 | 95.45 | 100.00 | 100.00 | 90.63 | 93.55 | 97.62 | 89.29 | 91.43 | 95.53 |
Dominance | 0.367 | 0.540 | 0.371 | 0.411 | 0.231 | 0.320 | 0.213 | 0.194 | 0.212 | 0.211 | 0.307 |
1 − Simpson diversity index | 0.633 | 0.459 | 0.629 | 0.589 | 0.769 | 0.679 | 0.787 | 0.806 | 0.788 | 0.789 | 0.693 |
Shannon's diversity index | 1.043 | 0.872 | 1.155 | 0.967 | 1.579 | 1.437 | 1.769 | 1.874 | 1.753 | 1.827 | 1.428 |
Evenness | 0.946 | 0.598 | 0.635 | 0.877 | 0.809 | 0.601 | 0.733 | 0.724 | 0.722 | 0.691 | 0.733 |