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. 2014 Sep;80(18):5636–5643. doi: 10.1128/AEM.02091-14

TABLE 2.

nifH diversity and coverage estimates for root DNA and RNA and shoot DNA

DNA/RNA type and parameter Value for plant no.:
Avg
E-01 E-04 E-06 E-08 E-13 E-18 E-28 E-31 E-36 E-40
Root DNA
    No. of taxa 11 12 14 15 8 10 5 5 9 9 9.8
    No. of clones 48 48 48 44 48 46 46 44 44 48 46.4
    Good's estimator (%) 89.58 83.33 93.75 79.55 95.83 93.48 97.83 93.18 93.18 95.83 91.55
    Dominance 0.201 0.237 0.133 0.137 0.248 0.158 0.306 0.717 0.185 0.170 0.249
    1 − Simpson diversity index 0.799 0.763 0.867 0.863 0.752 0.842 0.694 0.283 0.815 0.829 0.750
    Shannon's diversity index 1.897 1.8 2.311 2.266 1.647 2.002 1.333 0.622 1.86 1.929 1.766
    Evenness 0.606 0.50411 0.721 0.643 0.649 0.740 0.759 0.372 0.711 0.765 0.646
Root RNA
    No. of taxa 5 6 3 1 1 3 1 6 3.25
    No. of clones 41 31 32 33 25 19 32 34 30.87
    Good's estimator (%) 97.56 93.33 100.00 100.00 100.00 100.00 100.00 100.00 98.86
    Dominance 0.327 0.611 0.639 1 1 0.424 1 0.279 0.659
    1 − Simpson diversity index 0.673 0.389 0.361 0 0 0.576 0 0.721 0.340
    Shannon's diversity index 1.271 0.884 0.656 0 0 0.972 0 1.492 0.659
    Evenness 0.713 0.404 0.643 1 1 0.882 1 0.741 0.798
Shoot DNA
    No. of taxa 3 4 5 3 6 7 8 9 8 9 6.2
    No. of clones 38 38 44 41 47 32 31 42 28 35 37.6
    Good's estimator (%) 100.00 97.37 95.45 100.00 100.00 90.63 93.55 97.62 89.29 91.43 95.53
    Dominance 0.367 0.540 0.371 0.411 0.231 0.320 0.213 0.194 0.212 0.211 0.307
    1 − Simpson diversity index 0.633 0.459 0.629 0.589 0.769 0.679 0.787 0.806 0.788 0.789 0.693
    Shannon's diversity index 1.043 0.872 1.155 0.967 1.579 1.437 1.769 1.874 1.753 1.827 1.428
    Evenness 0.946 0.598 0.635 0.877 0.809 0.601 0.733 0.724 0.722 0.691 0.733