TABLE 4.
Highly regulated genes in the RNA-Seq data with a possible esa boxa
| ASAP no. | Locus tag (gene name) | Protein product | Fold regulationb | Promoter bound by EsaR |
|---|---|---|---|---|
| ACV-0290526 | CKS-0458 | Sigma-fimbria uncharacterized paralogous subunit | 11.5 (R) | Yes |
| ACV-0289766 | CKS-3373 (spy) | Envelope stress-induced periplasmic protein | 9.5 (A) | No |
| ACV-0288878 | CKS-4672 (yjbE) | Secreted protein | 7.7 (R) | Weakly |
| ACV-0287180 | CKS-1103 | Conidiation-specific protein, stress induced | 6.7 (R) | Yes |
| ACV-0290380 | CKS-0606 (yciF) | Uncharacterized DUF892 family protein | 5.7 (R) | Yes |
| ACV-0288895 | CKS-4689 | Conjugative transfer protein | 5.7 (R) | No |
| ACV-0288505 | CKS-0881 | Uncharacterized DUF1471 family protein | 5.7 (R) | Yes |
| ACV-0289538 | CKS-2247 (wceL) | Exopolysaccharide biosynthesis protein | 4.7 (R) | Yes |
| ACV-0289613 | CKS-2172 (lysP) | Lysine-specific permease | 4.4 (R) | No |
| ACV-0287610 | CKS-5070 (osmY) | Osmotically inducible protein | 4.3 (R) | Yes |
| ACV-0286879 | CKS-2708 (wceG2) | Undecaprenyl-phosphate galactose phosphotransferase | 4.2 (R) | Yes |
| ACV-0287347 | CKS-2413 (elaB) | Protein of unknown function DUF883 | 4.0 (R) | Yes |
a
Well-defined +1 site with a possible esa box nearby.
b
Fourfold or more regulation as determined by RNA-Seq data: A, activation; R, repression.