TABLE 2.
Oligonucleotide primers used in this study
| Locus | Primers (5′–3′)a | Reference(s) |
|---|---|---|
| Microsatellite loci | ||
| Ago53 | F: TGACGAACGTGGTTAGTCGT | 62 |
| R: TGACGAACGTGGTTAGTCGT | ||
| Ago89 | F: GAACAGTGCTCGCAGTCTAT | 62 |
| R: GACAGCGTAAACATCGCGGT | ||
| Ago59 | F: GCGAGTGGTATTCGCTTAGT | 62 |
| R: GTTACCCTCGACGATTGCGT | ||
| Ago66 | F: TCGGTTTGGCAACGTCGGGC | 62 |
| R: GACTAGGGAGATGCCGGCGA | ||
| Ago24 | F: TTTTCCCGGCACACCGAGT | 62 |
| R: GCCAAACTTTACACCCCGC | ||
| R5.10 | F: CGACTAAGCTTAATATTGTTTG | 63 |
| R: CGGTTCGGAGAACATAAGAG | ||
| S23 | F: GGTCCGAGAGCATTCATTAGG | 64 |
| R: CGTCGTTGTCATTGTCGTCG | ||
| s17b | F: TTCTGGCTTCATTCCGGTCG | 64 |
| R: CGTCGCGTTAGTGAACCGTG | ||
| APSE variable cassette region | ||
| APSE4 P5 to P8 | F: AGACATGGACCCCGAGGTGA | Modified from references 41 and 43 |
| R: TCGCCTACTACAATACCTACCTGGC | ||
| APSE4 P8 and P9 | F: GCGCTAGTGCTTGTTTTAGGCGG | Modified from references 41 and 43 |
| R: GCCGGGATCATCTGCTCTTTCGC | ||
| APSE4 P9 and P10 | F: ACCTGGACCCATCAAAGAGAGTTCA | Modified from references 41 and 43 |
| R: AACGTAGCAAGGCCAGGCGG | ||
a
F, forward; R, reverse.