TABLE 3.

Regulation of genes coding for the CAZymes^a

ProtID		Fold upregulation in oak vs control	Cyber-T		Annotation
v2.0	v2.2		ppde,p	BH
37522	2972234	11.40	0.9978	2.87E−03	Glycoside hydrolase family 20
121193	2980158	11.10	0.9882	1.76E−02	Lytic polysaccharide monooxygenase (formerly GH61)
137216	3024803	10.42	0.9826	2.61E−02	Glycoside hydrolase family 7
40899	2978123	9.44	0.9905	1.41E−02	Glycoside hydrolase family 18
129072	2976248	8.97	0.9711	4.27E−02	Glycoside hydrolase family 7
42616	42616	7.56	0.9833	2.50E−02	Lytic polysaccharide monooxygenase (formerly GH61)
39389	2914306	5.14	1.0000	8.72E−06	Glycoside hydrolase family 16
4967	2982894	4.34	0.9791	3.12E−02	Lytic polysaccharide monooxygenase (formerly GH61)
1106	2965653	4.28	0.9654	4.95E−02	Six-hairpin glycosidase-like
9257	2919526	4.21	0.9758	3.63E−02	Glycoside hydrolase family 3
130517	2918304	4.09	0.9889	1.66E−02	Carbohydrate-binding module family 1/carbohydrate esterase family 15 protein
1924	2899497	3.27	0.9817	2.74E−02	Glycoside hydrolase family 85
138813	2909460	2.77	0.9980	2.64E−03	Glycoside hydrolase family 15/carbohydrate-binding module family 20
132605	2974311	2.75	0.9864	2.04E−02	Glycoside hydrolase family 63
121774	2989703	2.38	0.9821	2.69E−02	Glycoside hydrolase family 5
4590	2907097	2.12	0.9914	1.27E−02	Six-hairpin glycosidase-like
10320	3003776	0.04	0.9977	3.04E−03	Lytic polysaccharide monooxygenase (formerly GH61)
333	2896433	0.03	0.9999	8.05E−05	Glycoside hydrolase family 43
134001	3010808	0.03	1.0000	4.03E−06	Carbohydrate-binding module family 1/glycoside hydrolase family 27
140501	140501	0.03	1.0000	2.80E−05	Carbohydrate-binding module family 1/glycoside hydrolase family 5
4550	2579514	0.03	1.0000	4.85E−07	Glycoside hydrolase family 47
125033	3005667	0.02	0.9986	1.71E−03	Glycoside hydrolase family 27
128442	3003144	0.01	1.0000	1.83E−05	Glycoside hydrolase family 3

^aProt ID from P. chrysosporium v2.0 and v2.2 JGI databases are reported. Annotations are those retrieved from v2.2.