. 2014 Oct;88(20):12158–12162. doi: 10.1128/JVI.01173-14

TABLE 1.

Parvovirus EVEs in C. lanigera and O. degus genomes

Element^a	GenBank accession no.	Orientation^b	Structure	Group^c	Match coordinate
					Scaffold		Viral genome^d
					Start	End	Start	End
C. lanigera-1	JH721894.1	−ve	NS-VP	Parvo	14636996	14641202	1137	4398
C. lanigera-2	JH721993.1	−ve	NS-VP	Parvo	459340	462818	1065	4428
C. lanigera-3	JH721905.1	−ve	NS	Dependo	7599480	7600235	717	896
C. lanigera-4*	JH721911.1	−ve	NS	Dependo	18094486	18095973	330	1684
C. lanigera-5a	JH721873.1	+ve	NS	Dependo	22669255	22669578	1428	1724
C. lanigera-5b	JH721873.1	+ve	NS	Dependo	22702412	22702712	1428	1724
C. lanigera-6	JH721896.1	−ve	VP	Dependo	13652894	13654833	4054	4407
O. degus-1	JH651603.1	+ve	NS-VP	Parvo	365906	369616	507	4443
O. degus-2	JH651624.1	−ve	NS-VP	Parvo	3857091	3858404	1089	2652
O. degus-3	JH651827.1	−ve	NS-VP	Parvo	1343057	1345620	295	3142
O. degus-4*	JH651579.1	+ve	NS	Dependo	8427679	8429061	321	1784
O. degus-5	JH651577.1	+ve	VP	Parvo	12296699	12296983	4135	4419
O. degus-6	JH651549.1	−ve	VP	Dependo	16377593	16377937	4063	4401

Asterisks denote elements carrying intact open reading frames.

Orientation of elements in scaffold (−ve, negative orientation; +ve, positive orientation).

Dependo, dependovirus-related EVEs; parvo, parvovirus-related EVEs.

Viral genome coordinates are based on pairwise alignment to genus-specific reference sequences of adeno-associated virus 2 (GenBank accession no. AF043303.1) for dependoviruses and mouse minute virus (GenBank accession no. J02275.1) for parvovirus-like elements.